BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F09SP1|AL426250
(766 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1181 1489 0.0
>3x_Contig1181
Length = 5187
Score = 1489 bits (751), Expect = 0.0
Identities = 763/766 (99%), Gaps = 1/766 (0%)
Strand = Plus / Minus
Query: 1 gatcctggttgaaaacaccacataaagccacaatgatatctttaccggaaatcccagctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1752 gatcctggttgaaaacaccacataaagccacaatgatatctttaccggaaatcccagctg 1693
Query: 61 gtaactctcccttcaactccacttgagccaccggaggaatctgccaccaagtttgaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1692 gtaactctcccttcaactccacttgagccaccggaggaatctgccaccaagtttgaccag 1633
Query: 121 tggcccaaatggctgctgcatcggtacgcacgatcggagtaccaagcgcaccaataccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1632 tggcccaaatggctgctgcatcggtacgcacgatcggagtaccaagcgcaccaataccac 1573
Query: 181 cgtatgtattggaatgagaatcagatgccacagtcatagttaacggaaacgcataacctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1572 cgtatgtattggaatgagaatcagatgccacagtcatagttaacggaaacgcataacctt 1513
Query: 241 cttcgatcatgatctgatgaccaataccacgacctgcggggtaaaaatcgatcccatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1512 cttcgatcatgatctgatgaccaataccacgacctgcggggtaaaaatcgatcccatgct 1453
Query: 301 tcttggcaaagttctcaatgttcttatatttggtcaaattcttctcactcttattctgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1452 tcttggcaaagttctcaatgttcttatatttggtcaaattcttctcactcttattctgaa 1393
Query: 361 catcatgatccaaagtattaaccacttgtcttgggttcttaatagtggacgcaccaagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1392 catcatgatccaaagtattaaccacttgtcttgggttcttaatagtggacgcaccaagac 1333
Query: 421 ccatgaacttcaacgctacaggccatgaattgtcatgtgacatacaatgagcaggtttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 ccatgaacttcaacgctacaggccatgaattgtcatgtgacatacaatgagcaggtttga 1273
Query: 481 tggaaacgtaatcaccagacacaactgtcttcccctcgggtaaaccaacagcatgtctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 tggaaacgtaatcaccagacacaactgtcttcccctcgggtaaaccaacagcatgtctct 1213
Query: 541 gaacaatcttttcagtcatgttctgtccagcatacaaagcacgggacgtgtcanaacatt 600
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 1212 gaacaatcttttcagtcatgttctgtccagcatacaaagcacgggacgtg-ctaaacatt 1154
Query: 601 cgtaatcgttgaactctaaacattctgtttctttcttttcaccactagctgagtgtgata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 cgtaatcgttgaactctaaacattctgtttctttcttttcaccactagctgagtgtgata 1094
Query: 661 acgggtatatgtgtgttacaggctaatgtctgttcttgatccttcctctcaaaaagatta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 acgggtatatgtgtgttacaggctaatgtctgttcttgatccttcctctcaaaaagatta 1034
Query: 721 accacagtactgtcacccaccagacaatatccaacctgtaaaacct 766
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 accacagtactgtcacccaccagacaatatccaacctgtaaaacct 988
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5099
Number of Sequences: 1807
Number of extensions: 5099
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 766
length of database: 10,358,551
effective HSP length: 16
effective length of query: 750
effective length of database: 10,329,639
effective search space: 7747229250
effective search space used: 7747229250
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)